As it's often said, cliches are cliches for a reason. Orphans generally lived a hard knock life. Orphans don't have familial ties weighing them down. Orphans are fairly common in a world where life can be brutal and short. You only have a half an hour to come up with a backstory and you want to focus on his time training with his mentor rather than his family. If your character is older than a pup there's the chance that your parents could've died of natural causes (still... technically an orphan?). There are a ton of reasons to play an orphan.
Any decent character can get away with a cliche in their background. Nearly every single comic character is an orphan. Being an orphan isn't a problem. Being an orphan combined with a half a dozen other cliches, or having "orphan" as your one word character description is.